Titel
Freiburg RNA tools: a central online resource for RNA-focused research and teaching
Autor*in
Martin Raden
Bioinformatics, Computer Science, University of Freiburg
Syed M Ali
Bioinformatics, Computer Science, University of Freiburg
Omer S Alkhnbashi
Bioinformatics, Computer Science, University of Freiburg
... show all
Abstract
The Freiburg RNA tools webserver is a well established online resource for RNA-focused research. It provides a unified user interface and comprehensive result visualization for efficient command line tools. The webserver includes RNA-RNA interaction prediction (IntaRNA, CopraRNA, metaMIR), sRNA homology search (GLASSgo), sequence-structure alignments (LocARNA, MARNA, CARNA, ExpaRNA), CRISPR repeat classification (CRISPRmap), sequence design (antaRNA, INFO-RNA, SECISDesign), structure aberration evaluation of point mutations (RaSE), and RNA/protein-family models visualization (CMV), and other methods. Open education resources offer interactive visualizations of RNA structure and RNA-RNA interaction prediction as well as basic and advanced sequence alignment algorithms. The services are freely available at rna.informatik.uni-freiburg.de.
Objekt-Typ
Sprache
Englisch [eng]
Persistent identifier
phaidra.univie.ac.at/o:1067909
Erschienen in
Titel
Nucleic Acids Research
Band
46
Ausgabe
W1
Publication
Oxford University Press (OUP)
Erscheinungsdatum
2018
Zugänglichkeit
Rechte
Rechteangabe
© The Author(s) 2018
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